
Ruthie Johnson
@ruthie_johnson
Berkowitz Postdoctoral Fellow; Dept Biomedical Informatics, Harvard Medical School. PhD UCLA Computer Science.
ID: 457310347
http://ruthjohnson95.github.io 07-01-2012 07:58:22
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Post review Rosace paper is out! Big thanks to the reviewers who helped us improve the benchmarks, refs, and language of the paper. DMS is a new area for us so it was especially helpful. First of many DMS papers to come! Congrats and great work, Jingyou Rao x.com/JingyouR/statu…


📢New! 📰A scalable and robust variance components method reveals insights into the architecture of gene-environment interactions underlying complex traits 🧑🤝🧑Sriram Sankararaman & colleagues cell.com/ajhg/fulltext/…

📢Online now! 📰Splicing-specific transcriptome-wide association uncovers genetic mechanisms for #schizophrenia 🧑🤝🧑Grace Xiao Bogdan Pasaniuc & colleagues cell.com/ajhg/fulltext/…





🚨New today! 📰Genes with differential expression across ancestries are enriched in ancestry-specific disease effects likely due to gene-by-environment interactions 🧑🤝🧑Juehan Wang Nicholas Mancuso & co cell.com/ajhg/abstract/…




A foundation model is used to rank drugs as potential indications and contraindications across 17,080 diseases, identifying therapeutic candidates even for diseases with no existing drugs Marinka Zitnik Kexin Huang Jure Leskovec Ben Glicksberg Girish Nadkarni nature.com/articles/s4159…

Medicine thrives on knowledge, yet clinical vocabularies are fragmented. AI struggles to unify this knowledge, creating a gap in precision medicine. Excited to share unified clinical vocabulary embeddings, a project led by stellar Ruthie Johnson Half of healthcare foundation AI


(1/4) Excited to introduce ProCyon: a multimodal foundation model to model, generate, and predict protein phenotypes, led by stellar Owen Queen Yepeng Robert Calef Valentina Giunchiglia 👉 biorxiv.org/content/10.110… ProCyon is an 11B parameter multimodal model that integrates protein


🌟Applications open- LOGML 2025🌟 👥Mentor-led projects, expert talks, tutorials, socials, and a networking night ✍️Application form: logml.ai 📅Apply by 6th April 2025 ✉️Questions? [email protected] #MachineLearning #SummerSchool #LOGML #Geometry



📢 🧬 New preprint! Can we predict which cancer patients will benefit, before treatment begins? Wan Xiang Shen Immunotherapy saves lives but many patients don’t respond to treatment, and we still lack reliable tools to predict who will benefit We introduce COMPASS, foundation

