🔥The 9th Round of Easy Loan, Earn $40 Reward is in progress❗️ ⏰ Promotion Period: January 15th - Feburary 15th, 2025 👉 Register now and check more details at gate.io/campaigns/358

HelmholtzAssociation is now ranked 8th in the nature Index for AI research! 🎉 We are excited that Helmholtz AI is featured, mentioned as one facet of the Helmholtz Association’s success in promulgating AI methods within the organisation, see more below: helmholtz.ai/detail/the-hel… #AI #ML

Excited to be judging at Lux Capital, EvolutionaryScale & @envedabio’s Bio x ML hackathon! Come build on top of the latest foundation models & workflows in computational biology. hackathon.bio

Sebastian S. Cocioba🪄🌷 I suppose my lab deboramarkslab.com - ha ha Might also look back at our protein structure from sequence too - umm 2011?

Are you interested in sc-spatial multiomics data, motivated by improving patient outcomes in lung cancer, and keen to join a young and growing lab taking single-cell atlassing to clinical applications? Please apply :). We're looking for Postdocs! jobs.helmholtz-muenchen.de/jobposting/43b…

I'm thrilled to present a new paper with Blei Lab and Elizabeth Wood 🧬🖥️🥼 about estimating the causal effects of T cell receptors in humans. arxiv.org/abs/2410.14127

I am on the academic job market this year! My research advances probabilistic machine learning and its application to biology. I'm looking for faculty positions in stats/CS/applied math and in bio departments. Academic website: eweinstein.github.io

Vaccines don't just add more guards to your immune system's security team, they also make them smarter and more versatile. @kischober Felix Drost Benjamin Schubert FAU Erlangen-Nbg Helmholtz Munich | @HelmholtzMunich Bildungsmisererepublik Deutschland - BRDigung DFG public | @[email protected] Else Kröner-Fresenius-Stiftung biorxiv.org/content/10.110…

Benchmarking of T-Cell Receptor - Epitope Predictors with ePytope-TCR 1. ePytope-TCR is introduced as an extension of the ePytope framework, integrating 18 TCR-epitope prediction methods within a unified platform. This advancement simplifies comparative benchmarking for

1/10 PREPRINT MONDAY at the SchubertLab Benchmarking TCR-Epitope Predictors with ePytope-TCR (doi.org/10.1101/2024.1…) Short-Summary: - 18 pre-trained public methods - evaluated on 2 benchmarking datasets - for repertoire annotation & cross-reactivity prediction

Very happy that our paper "CliquePH: Higher-Order Information for Graph Neural Networks through Persistent Homology on Clique Graphs" has been accepted at Learning on Graphs Conference 2024 ! a huge thanks to my co-authors Farzin Soleymani Bastian Grossenbacher-Rieck

Getting this published took a lot of persistence, in more than one way, but Davide Buffelli prevailed. Very excited to see this out and thanks for your hard work on this!!! 🎉

T cells that have not undergone MHC selection can bind soluble antigens, such as proteins or peptides, without the need for MHC presentation. 😱😱sciencedirect.com/science/articl…

🚀 Precision Cancer Immunotherapy with AI-Designed pMHC Binders 🧬 In collaboration with DTU Bioengineering, @DTUHealthTech, and Scripps Research, we developed a de novo binder design pipeline for #pMHCs biorxiv.org/content/10.110…

Coming up today at #NeurIPS2024! Poster #3303 in the East Exhibit Hall from 16:30 to 19:30 EST! My awesome student Katharina Limbeck will present her great work while I'll try to ignore the ML FOMO at home 😅

Extremely pleased to share our new work in collaboration with the Todd M. Brusko lab where we leveraged one of the largest TCRbeta sequencing datasets to identify T1D-associated TCR-based signatures. Paper link and 🧵 are below. Incredible work led by Puneet Rawat, PhD.

Only in German, but what a nice way to be welcomed by Uni Fribourg. Read on if you want to learn about the new SBFI SEFRI SERI / European Research Council (ERC) project on #geometry and #topology, which is about to start here.

Come join us on an exciting joint PhD project on ML for protein function with VilleKaila -- We are looking for a strong quantitative candidate with prior experience in ML. The position is based in Gothenburg and is fully funded for 5 years. chalmers.se/en/about-chalm…

Two major life updates: - moving to Senior Applied Research Scientist in Digital Biology at NVIDIA (Jan '25) - starting a new lab at Duke as Visiting Prof (early '25) Both roles focus on tackling hard problems in biological machine learning through collaborative research.

The IMMREP25 TCR specificity prediction challenge is now live on Kaggle! Get involved: kaggle.com/competitions/i… Huge thanks to: Matthew Noakes, Damon May, Eve Richardson bpeters Adaptive Biotech Immune Epitope Database airr_community

Can AI enable safe vaccines at scale that last? Can we anticipate immune response? We tested this .. See cell.com/immunity/fullt… and hms.harvard.edu/news/building-… And big thx to CEPI for funding