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See our paper on the #controllability of metabolic fluxes in cancer published in Nature Communications. nature.com/articles/s4146…

Petronela Buiga's article on kinetic modelling of DUSP regulation in HER2‐positive breast cancer is published in Genes. Petronela Buiga, DDS-MBA, PhD doi.org/10.3390/genes1…

Jamie Soul's article on SkeletalVis is published in Bioinformatics doi.org/10.1093/bioinf…. See our resource at phenome.manchester.ac.uk

Helena Herrmann's article is published in npj Systems Biology and Applications, showing how to use flux sampling to study photosynthetic acclimation of plants to cold. doi.org/10.1038/s41540…

Hello Everyone !!! Here is our 2020 series of #Pegsbioinformatics looking forward to see many of you at 3pm on Friday 24th. please RT UoM Biology, Medicine and Health FBMH Doctoral Academy 🌎 FBMH postgrads Manchester Cancer Research Centre CRUK Manchester Institute North West Genomic Laboratory Hub The University of Manchester Manchester Breast Centre #Pegsbioinformatics2020

Our contribution towards modelling the pandemics: we highlight the importance of incorporating the network structure into models and targetting hubs for mitigation. medrxiv.org/content/10.110…

« Il faut intégrer la structure des interactions sociales dans les modèles de diffusion de l’épidémie » lemonde.fr/idees/article/… via Le Monde

Gianluca Manzo: "these models can only lead to one type of intervention, i.e., interventions that indifferently concern large subsets of the population or even the overall population". sociologica.unibo.it/article/view/1…

Important and apparently forgotten work showing how the focus on "R0" can be misleading and that "individual-specific control measures outperform population-wide measures" disq.us/t/2wykqtk

"Model Parameterization with Quantitative Proteomics: Case Study with Trehalose Metabolism in Saccharomyces cerevisiae"mdpi.com/2227-9717/9/1/…, from Dr. Chuan Fu Yap, Dr. Manuel Garcia Albornoz, Dr. Andrew F. Jarnuczak, Prof. Simon J. Hubbard and Dr. Jean-Marc Schwartz.

Another great overview of superspreading for SARS-CoV-2 propagation by Dyani Lewis. nature.com/articles/d4158… However, once again, no attention for how social network analysis can help tracing superspreaders at the individual level. Solutions exist 👇 jasss.soc.surrey.ac.uk/23/4/10.html

Congratulations to Jo Watson for her publication on using multilayer heterogeneous networks to infer functions of phosphorylated sites. doi.org/10.1021/acs.jp…

Cytosolic fumarase acts as a metabolic fail-safe for both high and low temperature acclimation of #Arabidopsis thaliana bit.ly/34pLw7X Helena A Saunders, Pablo I Calzadilla, Jean-Marc Schwartz GilesNJohnson

Data integration and mechanistic modelling for breast cancer biology: ... sciencedirect.com/science/articl…

Congratulations to Jo Watson who had a paper published last week in Nucleic Acids Res featuring her app which uses our pilot Shiny service! research-it.manchester.ac.uk/news/2022/05/2…

SysBioRio 2022, evento destinado a interessados ​​na sinergia entre Biologia, Computação, Matemática, Física, Engenharia, Imunologia e áreas afins, irá acontecer entre 20 e 22 de julho, no Rio de Janeiro. Mais detalhes em 4et.us/rdgrtp #bioinformatica #ab3cdivulga

doi.org/10.1038/s41540…

In pre-print now! Soukaïna Timouma Jean-Marc Schwartz Natalia Development of a genome scale metabolic model for the lager hybrid yeast S. pastorianus to understand evolution of metabolic pathways in industrial settings. biorxiv.org/content/10.110…

iTMU798, the genome-scale metabolic model of the mouse whipworm Trichuris muris: doi.org/10.1038/s41467…

Genome scale model of the aneuploid yeast S. pastorianus now out in mSystems! Well done Soukaïna Timouma Natalia Jean-Marc Schwartz journals.asm.org/doi/10.1128/ms…