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MNXref version 3.1 is now online! More information at metanetx.org/mnxdoc/mnxref.… and ftp://ftp.vital-it.ch/databases/metanetx/MNXref/latest

Zooming into our metabolism | The #metaboGSE #Rpackage developed by scientists from SIB's Vital-IT Group and CHUV / Centre hospitalier universitaire vaudois allows to combine #GSMN and #RNAseq information to get a closer look at the regulatory basis of #metabolism. Read more: goo.gl/cZgkxU

We now have a Bioconductor #Rstats package to use our reference intergenic regions to call gene expression present/absent in an objective wayfrom #RNAseq: BgeeCall bioconductor.org/packages/relea… 👍J Wollbrett, Sara Fonseca Costa, Julien Roux (@julienroux.bsky.social on 🦋), Frederic Bastian

MNXref version 3.2 is now online! More information at metanetx.org/mnxdoc/mnxref.… and ftp://ftp.vital-it.ch/databases/metanetx/MNXref/latest

Hello world! After some time of dormancy, we are back in business! First, new interface and new url: selectome.org New selection data based on recent Ensembl gene trees and Godon software coming soon! Iakov Davydov @[email protected] Moretti Sébastien Marc RobinsonRechavi @[email protected] Nicolas Salamin DEE UNIL

We are recruiting a #biocurator to work on single cell data, metadata, and analysis standards. It's an exciting new project between Bgee and ASAP SIB DEE UNIL EPFL. Join us in 🇨🇭 to contribute to FAIR data and knowledge about single-cell biology. bit.ly/3XIcRsp

New Selectome release! Positive selection for >15k vertebrate gene trees selectome.unil.ch #bioinformatics #evolution #phylogeny

New Selectome release: a complete overview of positive selection in #Primates selectome.unil.ch #bioinformatics #phylogeny #evolution

FastCodeML published: efficient parallel branch-site test implementation bioinformatics.oxfordjournals.org/content/early/… #bioinformatics #phylogeny #evolution

.Selectome has used 1.6M hours CPU since 2007. Thanks to Vital-IT SIB. Future: more efficient software, more data. #bioinformatics

Biological P & NP problems attract more and more computational scientists (Avi Wigderson) #EPFLICRD

Swiss data sciences initiative at ETH (EPFL & ETH Zürich) ethz.ch/intranet/en/ne…

Muthu Muthukrishnan: More efficient and smart algorithms applied to online advertising! #EPFLICRD

Natural selection & Evolution in computer science by Christos Papadimitriou at #EPFLICRD

Funny and very active molecule at MetaNetX: MNXM35999 metanetx.org/cgi-bin/mnxweb… via MetaNetX

"Biochemical Pathways and Large Scale Metabolic Networks" course by SIB at Lausanne, Aug 29th to Sep 2nd sib.swiss/training/upcom…

SwissTree large publication in BioRxiv "Taxon sampling unequally affects individual nodes in a phylogenetic tree..." doi.org/10.1101/181966

Condition-specific series of metabolic sub-networks and its application for gene set enrichment analysis doi.org/10.1101/200964

Postdoc position, working with Bgee database, to develop new methods of transcriptome analysis: e.g., integrated analysis across data types, single-cell RNA-seq, long read transcriptomics, comparison of expression between species... apply.refline.ch/499599/0061/pu… #bioinformatics #rnaseq

Open position to work with the Selectome team: bit.ly/2vqm3sC