Pipeline release! nf-core/pangenome v1.1.1 - pangenome 1.1.1 - LATÜRNICH! Please see the changelog: github.com/nf-core/pangen…

Cluster efficient pangenome graph construction with nf-core/pangenome biorxiv.org/content/10.110…

We are starting our MemPang24 course today, happy to have all of you! #MemPanG24 #pangenome Erik Garrison Andrea Guarracino Simon Heumos Pjotr Prins Enza Colonna Robert W. Williams UTHSC Research UTHSC College of Graduate Health Sciences

Wrapping up the #MemPanG24 course! Thanks to everyone who participated and made it such an enjoyable experience. #WeAreTheFrogs! #Memphis #pangenome #UTHSC

Excited to share a new preprint! We developed a new algorithm for POA, POASTA (pronounce it with your best Bo-ah-ston accent). It is based on the A* framework and inspired by other recent alignment algorithms such as the WFA and Astarix. biorxiv.org/content/10.110…

Heading to #eshg2024 shortly - we have four post doctoral positions in computational genomics, graph genomes, blood single cell genomics, and statistics coming online soon - get in touch if you are interested in meeting up and discussing any of these

Graduate Research Day was full of great science! UTHSC College of Graduate Health Sciences The University of Tennessee Health Science Center UTHSC Research

Want to talk about immunopeptidomics pipelines at #ASMS2024? Come visit Jonas Scheid at poster 582!

It’s only June and we already have 20 fantastic sessions confirmed for BGA24! These cover manual-curation, assembly pipelines, annotation, tools for manipulation and exploration and more! You can find out more at thebgacademy.org! #BGA #bioinformatics #EBP #genomics

Panacus: fast and exact pangenome growth and core size estimation biorxiv.org/content/10.110…

Hot times at our 3-day #RomePanG24 course in #Rome! 🌍Participants are deeply engaged in hands-on activities, learning to leverage #pangenomics! 🧬💻 #Pangenome #Assembly #PangenomeGraphs Erik Garrison Flavia Villani

Pangenome graph layout by Path-Guided Stochastic Gradient Descent academic.oup.com/bioinformatics…

Pangenome graph layout by Path-Guided Stochastic Gradient Descent academic.oup.com/bioinformatics… 🧬🖥️ github.com/pangenome/odgi

Cluster-efficient pangenome graph construction with nf-core pangenome academic.oup.com/bioinformatics…

"Challenging" publication on Nature Methods, co-authored with Erik Garrison and made together with many friends: Simon Heumos Flavia Villani Zhigui Bao 鲍志贵, zbao.bksy.social Lorenzo Tattini and way others more!