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RT for the Monday morning crowd 😃

I’m teaching students in my class tomorrow about the Unix shell and the command line. SO excited to wear this shirt tomorrow!

Beautiful beets from the garden 🪴

Today I'm thinking about the strong mentors I've been fortunate to know. In particular the women leaders in the fields in #Statistics #DataScience #Genomics #ComputationalBiology #ML #Imaging Thank you -- you are inspiration to so many, me included 🙏

I am so appreciative for how talented and creative my students are! Posted outside their office door ❤️

🔥Johns Hopkins BME is hiring in Biomedical Data Science🔥Interested in problems in healthcare and data-driven solutions? Come join us at Johns Hopkins University with amazing colleagues NeuroData Lab Stephanie Hicks, PhD Adam Charles Winston Timp Casey Overby Taylor and many others! bme.jhu.edu/careers-indust…

Day 1 of awesome science this week with the start of the AnVIL Community Conference. Awesome presentations by all, especially today’s keynote speakers Tychele Turner and Anshul Kundaje. Can’t wait for all the discussions tomorrow!

My heart is broken for all the children that will die from this decision. Vaccines save lives. It not only to protects yourself, but also protects those that cannot get vaccinated. Also, it reduces the burden on our already overwhelmed healthcare system. apnews.com/article/louisi…

Hi! I am a scientist who works with #biomedical data to better understand #neurodegenerative & #neuropsychiatric disorders and ovarian #cancer. My research is funded by the NIH and nonprofits. If you have Qs about how recent changes are impacting #science, I'm happy to chat

They found a loop hole around the court order to unfreeze NIH funds. Grant review panels cannot be registered with the HHS now and so grants can't be reviewed and hence can't be disbursed. Stalling will have very serious long term consequences. thetransmitter.org/funding/federa…

New paper out in Genome Research on using contrastive self-supervised learning for spatial domain detection with multi-omics data! Huge congratulations to Jianing Yao and coauthors Jinglun Yu, Brian Caffo Stephanie Page & Keri Martinowich! 🧬 doi.org/10.1101/gr.279…

Looking forward to visit Icahn School of Medicine at Mount Sinai tomorrow morning. If you are around NYC and are interested in single cell / spatial genomics, the talk starts at 10am. Hope you see you there! events.mountsinaihealth.org/event/genetics…

Very excited to see this important work out led by the talented Michael Totty Boyi Guo 郭博逸 jhubiostat!

Huge congratulations Boyi Guo 郭博逸! We are so proud of you and can’t wait to see what you do in this next chapter

If your adjusted p-values are capped at the smallest possible number that your computer can calculate (~ log10(p) = 307), that should be a sign that it was not a stringent statistic test. Pseudobulking goes a long way to solve this.