Hey Talmo Pereira 🇧🇷 and Mackenzie Mathis, PhD ! If you haven’t heard about this neat package called movement, you should! It seems pretty cool! github.com/neuroinformati… It’s from Niko Sirmpilatze (I think he’s only on mastodon) and the SWC/GCNU Neuroinformatics Unit. Looks pretty sweet!

Testing the beta version for our Astyanax atlas package with BrainGlobe. Big thanks to Alessandro Felder for his help in making this happen! Look for the package and resource paper coming soon.

Meet our Neuroinformatics Unit! Driven by an open science ethos, the team of research software engineers work closely with SWC and Gatsby Computational Neuroscience Unit researchers to build tools that improve data organisation, refine analysis pipelines, and more: sainsburywellcome.org/web/blog/neuro… SWC/GCNU Neuroinformatics Unit

Nice piece about our team (SWC/GCNU Neuroinformatics Unit) at SWC & Gatsby Computational Neuroscience Unit. We’re building open source software tools for neuroscience and machine learning. Find out more at our website (neuroinformatics.dev) and GitHub (github.com/neuroinformati…).

We've added a new atlas, Robert Kozol's brain atlas of the blind Mexican cavefish, Astyanax mexicanus. More details on the blog: brainglobe.info/blog/cavefish-…

Please join the INCF + OCNS Software Working group on 9th July for our next meeting. Adam Tyson from the Sainsbury Wellcome Centre will talk about the #software tools their group develops for #SystemsNeuroscience: ocns.github.io/SoftwareWG/202… #Neuroscience

We’re hiring! Join us as a Senior Research Data Steward. You’ll provide technically focused support and consultancy to researchers and promote Open Science and FAIR data principles. Learn more and apply: sainsburywellcome.org/web/content/cu…

Come work at SWC with us (SWC/GCNU Neuroinformatics Unit) and scientific computing to help us manage and share lots and lots of cool neuroscience data.

We've just released the "brainmapper" widget allowing analysis of cellular distributions in whole-brain microscopy images entirely within napari🔬. Full details available on the blog: brainglobe.info/blog/brainmapp…

BrainGlobe now includes an atlas with barrel column annotations from Bolaños-­Puchet & Aleksandra Teska et al. Full details on the blog: brainglobe.info/blog/barrel-at… Thanks to @axlbsi for bringing this to BrainGlobe! Original paper: doi.org/10.1162/imag_a…

Nice tutorial on how to combine BrainGlobe and BiaPy to detect cells in whole brain microscopy images. We're always interested in ways to make our software interoperable with other tools. biapy.readthedocs.io/en/latest/tuto…

Interested on detecting and then visualizing cells in a full brain? 🧠 Don't miss our tutorial on how to do it using BrainGlobe & BiaPy! Open source initiatives together are stronger 💪

One more week to apply for this job. Happy to answer any questions via DM.

BrainGlobe has a new atlas, the Axolotl (Ambystoma mexicanum)! For more details see the blog: brainglobe.info/blog/axolotl-a… Original paper: doi.org/10.1038/s41598…

Congratulations to the BrainGlobe team on their Open Science Award 🙌

.BrainGlobe is improving the way neuroscientists analyse and visualise neuroimaging data 🐟🦀🧠 Find out more about their work, and their recent recognition from UCL Open Science and Scholarship, in our latest blog: sainsburywellcome.org/web/blog/brain… #OpenSource #Neuroscience

BrainGlobe has a new atlas, the prairie vole! For more details see the blog: brainglobe.info/blog/prairie-v… Original paper: doi.org/10.7554/eLife.…

If you’re leaving this app, we’re on: Mastodon at mastodon.online/@neuroinformat… Bluesky at bsky.app/profile/neuroi…

Movement now has a blog! We discuss the new version (v0.0.21), plans for the future and announce our new community calls. For more details see: movement.neuroinformatics.dev/blog/movement-…