Adrià Casamitjana (@therelaxationt1) 's Twitter Profile
Adrià Casamitjana

@therelaxationt1

Post-doc researcher interested in medical imaging and machine learning

ID: 1013395774883946497

linkhttps://acasamitjana.github.io/ calendar_today01-07-2018 12:15:55

42 Tweet

133 Followers

301 Following

Juan Eugenio Iglesias (@juaneugenioigl1) 's Twitter Profile Photo

Preprint, code & model of SynthSeg are out! Obtain 1 mm segmentations of brain MRI scans of ANY contrast/resolution with a single CNN. Work with @LeemputKoen, Adrian Dalca, @BruceFischl et al FreeSurfer Try it now! Code: github.com/BBillot/SynthS… Paper: arxiv.org/abs/2107.09559

Preprint, code &amp; model of SynthSeg are out! Obtain 1 mm segmentations of brain MRI scans of ANY contrast/resolution with a single CNN. Work with @LeemputKoen, <a href="/AdrianDalca/">Adrian Dalca</a>, @BruceFischl  et al
<a href="/FreeSurferMRI/">FreeSurfer</a>
Try it now!
Code: github.com/BBillot/SynthS…
Paper: arxiv.org/abs/2107.09559
Adrià Casamitjana (@therelaxationt1) 's Twitter Profile Photo

Excited to have won the best paper award of SASHIMI Workshop @ MICCAI 2025 2021! We presented Synth-by-Reg, a contastive learning approach to image synthesis and registration (link.springer.com/chapter/10.100…) Thanks to all the organizers and participants for such a great workshop!

Juan Eugenio Iglesias (@juaneugenioigl1) 's Twitter Profile Photo

SynthSeg is now available in the development version of FreeSurfer at surfer.nmr.mgh.harvard.edu/pub/dist/frees…. You can simply run "synthseg --i in.nii --o out.nii" to segment brain MR of any resolution & contrast. Paper at arxiv.org/abs/2107.09559 With @LeemputKoen, Adrian Dalca, @BruceFischl

SynthSeg is now available in the development version of <a href="/FreeSurferMRI/">FreeSurfer</a> at surfer.nmr.mgh.harvard.edu/pub/dist/frees…. You can simply run "synthseg --i in.nii --o out.nii" to segment brain MR of any resolution &amp; contrast.
Paper at arxiv.org/abs/2107.09559
With @LeemputKoen, <a href="/AdrianDalca/">Adrian Dalca</a>, @BruceFischl
Emma R - @metricsemma.bsky.social (@emrobsci) 's Twitter Profile Photo

12 month Commonwealth scholarships for students **currently in PhD training** in low to middle income commonwealth countries to take a funded 12 month placement in the UK. Happy to support interested candidates - deadline quite tight (17th Feb). cscuk.fcdo.gov.uk/scholarships/c…

Girona set de ciència #GironaCiència (@girona7ciencia) 's Twitter Profile Photo

Ja tenim programació del Festival Pint of Science a Girona !! pintofscience.es/events/gerona Reserveu les dates !!! 9, 10 i 11 de maig !! 19:30h !! A #Kerunta i #Sbarjo #Pint22GIR #Pint22ES #GironaCiència Els propers dies anirem desgranant la programació !!!

Ja tenim programació del Festival Pint of Science a Girona !!
pintofscience.es/events/gerona
Reserveu les dates !!! 9, 10 i 11 de maig !! 19:30h !!
A #Kerunta i #Sbarjo
#Pint22GIR #Pint22ES #GironaCiència
Els propers dies anirem desgranant la programació !!!
Adrià Casamitjana (@therelaxationt1) 's Twitter Profile Photo

If interested in applying ML to explore the subcortex, check out our recent "High-resolution atlasing and segmentation of the subcortex: review and perspective on challenges and opportunities created by machine learning". Work done with Juan Eugenio Iglesias sciencedirect.com/science/articl…

Juan Eugenio Iglesias (@juaneugenioigl1) 's Twitter Profile Photo

Fun video on our 3D reconstruction & segmentation algorithms for brain dissection photos: youtu.be/wo5meYRaGUY Methods available on FreeSurfer Preprint available here: biorxiv.org/content/10.110… Work with Henry Tregidgo Adrià Casamitjana Adrian Dalca and many others!

Fun video on our 3D reconstruction &amp; segmentation algorithms for brain dissection photos:
youtu.be/wo5meYRaGUY
Methods available on <a href="/FreeSurferMRI/">FreeSurfer</a> 
Preprint available here: biorxiv.org/content/10.110…
Work with <a href="/HTregidgo/">Henry Tregidgo</a> <a href="/therelaxationt1/">Adrià Casamitjana</a> <a href="/AdrianDalca/">Adrian Dalca</a> and many others!
Juan Eugenio Iglesias (@juaneugenioigl1) 's Twitter Profile Photo

After seven (7!) years of work with >20 researchers at 10 different institutions, we are super excited to release NextBrain, a next-gen probabilistic atlas of the human brain with 333 regions: github-pages.ucl.ac.uk/NextBrain Preprint, data, code, videos, and much more in this 🧵(1/5)

After seven (7!) years of work with &gt;20 researchers at 10 different institutions, we are super excited to release NextBrain, a next-gen probabilistic atlas of the human brain with 333 regions:
github-pages.ucl.ac.uk/NextBrain
Preprint, data, code, videos, and much more in this 🧵(1/5)
SASHIMI Workshop @ MICCAI 2025 (@sashimiworkshop) 's Twitter Profile Photo

We’re thrilled to announce #SASHIMI2024 at #MICCAI2024 in Marrakesh! 🌍✨ Please join us for the 9th SASHIMI workshop and contribute to the future of simulation and synthesis in medical imaging! Important dates and call for papers: 2024.sashimi-workshop.org/call_for_paper… #MedicalImaging

We’re thrilled to announce #SASHIMI2024 at #MICCAI2024 in Marrakesh! 🌍✨ Please join us for the 9th SASHIMI workshop and contribute to the future of simulation and synthesis in medical imaging! Important dates and call for papers: 2024.sashimi-workshop.org/call_for_paper… #MedicalImaging
SASHIMI Workshop @ MICCAI 2025 (@sashimiworkshop) 's Twitter Profile Photo

💛‼️ Friendly reminder ‼️ 💛 #SASHIMI2024 is open for paper submissions at #MICCAI2024 in Marrakesh! 🌍📷 Please join us to discuss simulation and synthesis in medical imaging! Submit here: 2024.sashimi-workshop.org/call_for_paper… #MedicalImaging

SASHIMI Workshop @ MICCAI 2025 (@sashimiworkshop) 's Twitter Profile Photo

🎉 We invite you to submit your work to #SASHIMI2024 at #MICCAI2024! 🎉 This workshop focuses on simulation and synthesis in medical imaging without restriction on method: deep networks and mathematical models are equally welcome! Call for papers here: 2024.sashimi-workshop.org/call_for_paper…

Juan Eugenio Iglesias (@juaneugenioigl1) 's Twitter Profile Photo

We have labeled the right hemisphere of the 100-micron MRI scan released by Edlow et al and will be making it publicly available soon. Stay tuned! Here's a video flying over axial slices: youtube.com/watch?v=bH09BV…

Juan Eugenio Iglesias (@juaneugenioigl1) 's Twitter Profile Photo

We have updated NextBrain with: - new atlas with improved brainstem. - updated segmentation code. - new labeled ex vivo dataset. - new preprint. Please see the project website for links and resources: github-pages.ucl.ac.uk/NextBrain

We have updated NextBrain with:
- new atlas with improved brainstem.
- updated segmentation code.
- new labeled ex vivo dataset.
- new preprint.
Please see the project website for links and resources:
github-pages.ucl.ac.uk/NextBrain