
Adrià Casamitjana
@therelaxationt1
Post-doc researcher interested in medical imaging and machine learning
ID: 1013395774883946497
https://acasamitjana.github.io/ 01-07-2018 12:15:55
42 Tweet
133 Followers
301 Following

Preprint, code & model of SynthSeg are out! Obtain 1 mm segmentations of brain MRI scans of ANY contrast/resolution with a single CNN. Work with @LeemputKoen, Adrian Dalca, @BruceFischl et al FreeSurfer Try it now! Code: github.com/BBillot/SynthS… Paper: arxiv.org/abs/2107.09559


Excited to have won the best paper award of SASHIMI Workshop @ MICCAI 2025 2021! We presented Synth-by-Reg, a contastive learning approach to image synthesis and registration (link.springer.com/chapter/10.100…) Thanks to all the organizers and participants for such a great workshop!

SynthSeg is now available in the development version of FreeSurfer at surfer.nmr.mgh.harvard.edu/pub/dist/frees…. You can simply run "synthseg --i in.nii --o out.nii" to segment brain MR of any resolution & contrast. Paper at arxiv.org/abs/2107.09559 With @LeemputKoen, Adrian Dalca, @BruceFischl





If interested in applying ML to explore the subcortex, check out our recent "High-resolution atlasing and segmentation of the subcortex: review and perspective on challenges and opportunities created by machine learning". Work done with Juan Eugenio Iglesias sciencedirect.com/science/articl…


Fun video on our 3D reconstruction & segmentation algorithms for brain dissection photos: youtu.be/wo5meYRaGUY Methods available on FreeSurfer Preprint available here: biorxiv.org/content/10.110… Work with Henry Tregidgo Adrià Casamitjana Adrian Dalca and many others!





🎉 We invite you to submit your work to #SASHIMI2024 at #MICCAI2024! 🎉 This workshop focuses on simulation and synthesis in medical imaging without restriction on method: deep networks and mathematical models are equally welcome! Call for papers here: 2024.sashimi-workshop.org/call_for_paper…


