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Two #opportunities for bioinformatician and HPC team lead with Peter Ebert and Tobias Marschall at Uniklinik Düsseldorf! Work on human structural variation with cutting-edge technology. lnkd.in/ePDbERFs lnkd.in/eVssDdSJ #bioinformatics #python #r #hpc #linux #sysadmin

🎉 Exciting news! Our lab's first publication in Genome Biology is out now! We've delved into the large-scale genomic differences between T2T-CHM13 and GRCh38, shedding light on their association with neurogenic disorders & the evolutionary history of the KLRC gene cluster. 🧬

Our Bio-Data Science Evenings in Düsseldorf are back, where we meet biodata enthusiasts on-site & have a great time together! Register & network forms.gle/CgvvxGiyJh1PmK… Thank you Tobias Marschall for coming by to tell us about a human pangenome reference! #hhu_biodata

I am thrilled to share our study on the de novo assembly and characterisation of 43 diverse human Y chromosomes, published today in nature, together with the first #T2T Y assembly from Adam Phillippy, Arang Rhie and co-authors nature.com/articles/s4158…

We are hiring: Do you want to contribute to preventing the spread of multi-resistant bacteria by building browser-bashed dashboards for analyzing and visualizing pathogen transmission chains?

Now out in Nature Communications! We developed EnsembleTR, an ensemble method to combine genotypes from 4 major tandem repeat callers and generated a genome-wide catalog of ~1.7 million TRs from 3550 samples in the 1000 Genomes and H3Africa cohorts. doi.org/10.1038/s41467…

-NGS webinar series- 9th November Thursday 11:00 CEST ...online-meet Philipp Schiffer - BioC2 priming biodiversity genomics in Germany. Register hhu.webex.com/weblink/regist… #ngscnjoin #ngscnwebinars #nextgenerationsequencing #genomics #ngstechnologies #transcriptomics

Leiter/Leiterin für das Genomics und Transkripromics Labor am BMFZ in Düsseldorf gesucht! Wunderbare Gelegenheit mit State-of-the-Art Next-generation-sequencing Techniken. E15 unbefristet Please Retweet Heinrich-Heine-Universität Düsseldorf Tobias Marschall HHU_Medizin @BMFZ_HHU jobvector.de/jobs-stellenan…

A long journey driven by Tobias Marschall in collaboration with Gunnar and I from @cepas_1 and Richard Finkers. Rebecca was relentless to answer how one can phase a tetraploid crop like #potato using hifi data as well as shallow offspring data. link.springer.com/article/10.118…

Want to annotate HLA/KIR genes and genotype them in a phased assembly? Try Immuannot, a new method from our group. It can identify novel alleles and reveal complex haplotype structures that short-read based methods may have troubles with. Available at github.com/YingZhou001/Im…

One more opening in my group at Oxford Nanopore. This time in our New York office! ejnh.fa.em2.oraclecloud.com/hcmUI/Candidat…

Preprint of our latest work is out. With SVarp, we aim to discover haplotype-resolved structural variants on top of a #pangenome reference using #LongReads Many thanks to Tobias Marschall Jan Korbel @tobias_757 Jana Ebler SamarendraPani

I'm absolutely thrilled to share that our work on human centromere variation and evolution has been published in nature! We completely sequenced all centromeres from a second human genome & compared them to those from the first complete human genome, uncovering new sequences,

Long-Read Nanopore Sequencing Boosts Structural Variant Analysis in 1000 Genomes Project Dataset genomeweb.com/sequencing/lon…

Heading home from #bog24 on the overday flight (sorry to miss the last session) and here are some thoughts from this Biology of Genomes

Looking for the best way to “complete” day3 of #eshg2024 and prepare the party 🎉 🕺 💃! Come and join Alexandre Reymond and I at the “Complete Genome” session. Amazing speakers : Evan Eichler EichlerLab Tobias Marschall Talkowski Lab ! 🤩 Don’t be late ! ⏰

Complex genetic variation in nearly complete human genomes biorxiv.org/content/10.110…