Yana Bromberg (@y_bromberg) 's Twitter Profile
Yana Bromberg

@y_bromberg

Bioinformatics geek, Prof @EmoryUniversity, DNA blueprint of life. All opinions personal

ID: 222567714

linkhttp://bromberglab.org calendar_today03-12-2010 20:05:46

355 Tweet

1,1K Followers

715 Following

(((Emanuel Miller))) 🇮🇱 (@emanumiller) 's Twitter Profile Photo

A radio interview this morning with the director of Israel's Institute of Forensic Medicine describes the current situation. There are 400 parts of bodies left unidentified. There are no longer whole bodies left. Just a collection of body parts. Body parts belonging to 400

A radio interview this morning with the director of Israel's Institute of Forensic Medicine describes the current situation.

There are 400 parts of bodies left unidentified. There are no longer whole bodies left. Just a collection of body parts. 

Body parts belonging to 400
Bundesministerium für Wirtschaft und Klimaschutz (@bmwk) 's Twitter Profile Photo

It's almost four weeks since the horrific terrorist attack on #Israel. A lot has happened, the public debate has become heated and confused. Find thoughts from Vice-Chancellor Robert #Habeck in the video, putting the events in context. 📣With English, Hebrew and Arabic subtitles.

Brooke Goldstein (@goldsteinbrooke) 's Twitter Profile Photo

A hero calling out the obsessive Jew hatred behind the “Free Palestine” rioters around the world and the ugly bigots tearing down posters of kidnapped children. 👏

Garry Kasparov (@kasparov63) 's Twitter Profile Photo

It's a parable, where every time a scorpion stings someone the victim gets a lecture on how to treat scorpion stings and how not to provoke scorpions. No one lectures the scorpions, and they don't listen anyway.

Eylon Levy (@eylonalevy) 's Twitter Profile Photo

Today’s revelation of Shifa Tunnels shines a spotlight on the Israel Defense Forces’s professionalism and the media’s sensationalism. This was filmed two days ago. For two days, we’ve faced criticism that the Shifa Terror Complex is all a big hoax. Patience pays.

Itai Yanai (@itaiyanai) 's Twitter Profile Photo

How did we lose our tail? A simple question.. but it wasn't really asked before! We discovered a plausible scenario for the genetic mechanism that led to tail loss. Amazing that such a big change may have been caused by such a small genetic event. nature.com/articles/s4158… Bo Xia

How did we lose our tail? A simple question.. but it wasn't really asked before! We discovered a plausible scenario for the genetic mechanism that led to tail loss. Amazing that such a big change may have been caused by such a small genetic event. nature.com/articles/s4158… <a href="/BoXia7/">Bo Xia</a>
Yana Bromberg (@y_bromberg) 's Twitter Profile Photo

Did some analysis of variant impact predictors. We really haven't improved much since the early 2000's. 😕 The bright side is that the unsupervised learners don't need experimental data. With Amarda Shehu, rpkaran, and Anowarul Kabir cshperspectives.cshlp.org/content/early/…

Yana Bromberg (@y_bromberg) 's Twitter Profile Photo

What do you do when someone cites your article for the wrong (and, frankly, opposite) reason? That is, we say "X is true", and the published citation is "Bromberg et al show that X is NOT true." I can write to the authors, but what does that change?

Yana Bromberg (@y_bromberg) 's Twitter Profile Photo

Awesome new work by @HenriChung (and Iddo Friedberg 💔𐤅‎𐤉𐤃‎‎𐤏‎ & I)! We show that a #metagenome can be parsed to identify molecular pathways emergent in a #microbiome. All collaboration should be acknowledged - especially if its the "little guys" that run our world! academic.oup.com/nargab/article…

Anshul Kundaje (anshulkundaje@bluesky) (@anshulkundaje) 's Twitter Profile Photo

biorxiv.org/content/10.110… Nice benchmark of single cell "foundation models" (scGPT, scFoundation) and GEARS (a GNN model) further hyped as "virtual cell models" against linear baselines on perturbation prediction. Long-story short: they can't beat the linear baselines. 1/

Anshul Kundaje (anshulkundaje@bluesky) (@anshulkundaje) 's Twitter Profile Photo

Nice work. The issue with current seq-> expression models in terms of their very poor performance on variant effect prediction is not that they need to see more variation data. The problem is they don't learn long range effects of enhancers effectively. 1/