Comet fragment-ion indexing for enhanced peptide sequencing biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

DIA-NN 1.9.2 is out! There are some major improvements, please check the release notes github.com/vdemichev/DiaN…

@chrashwood Robbin Bouwmeester Michael Lazear Fengchao Yu fuzzyLife Georg Wallmann Tanveer Batth MaxQuant GitHub Jimmy Eng The Trans Proteomic Pipeline has always been free and fully open source since it inception and will remain that way. We courage I out into the source code as a collective community development for enterprise scale data processing and bioinformatics.

Auf Wiedersehen Dresden! iPRG Team at the #HUPO2024 Michael Hoopmann ⁦Pratik Jagtap⁩ Sue Weintraub ⁦Magnus Palmblad⁩ ⁦Yasset Perez-Riverol⁩ #Tschuess

I respect all in #OpenSource discussions in #proteomics. We share challenges but face different constraints. My hope is that transparency, openness, kindness, and collaboration lead the way. In science, our biggest legacy is setting the bar for those who come after us.

This could be a good time to remind those that may have not seen it before, that the reactome database at EMBL-EBI also has a library of open access icons reactome.org/icon-lib

Excited to share that the AlphaFold 3 model code and weights are now available for academic use. Looking forward to seeing what new research this unlocks and how the research community builds on AlphaFold 3 for scientific discoveries github.com/google-deepmin… 1/2

To my followers, I have found a surprisingly healthy and clean environment from ads, politics and other craps #Bluesky. This is my handle there bsky.app/profile/yprive…

🚀 Attention DIA/DDA #proteomics users! Whether you're using #DIANN, #MaxQuant, #quantms, or any tool that outputs mzIdentML and mzML, pmultiqc v0.0.29 is here!💡 Create stunning, shareable HTML reports for your collaborators in seconds.✨ Try pmultiqc.quantms.org 👇